PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100194820061
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family TCP
Protein Properties Length: 168aa    MW: 18786.2 Da    PI: 5.592
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100194820061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP393e-1221693766
                           TCP 37 deLGfdkdsktieWLlqqakpaikeltgt...................s 66
                                  d+LG+d++sk+i+WL+++akpai++l+                     +
  Ote100194820061|100194820061 21 DRLGYDRPSKAIDWLIKEAKPAIDALAPPpxxxxxxxxxxxxxxxaadQ 69
                                  9**************************9955544444433333322220 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136912.91146IPR017887Transcription factor TCP subgroup
PfamPF036343.5E-82149IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MKAAKTSVVK VGGRKDRHSK DRLGYDRPSK AIDWLIKEAK PAIDALAPPP XXXXXXXXXX  60
XXXXXAADQS NTKIEHDCNI PWASAGFGFF KSEEQFLPAP PNSEANAGEG VEDYSNFHMR  120
EPLQSSNWSQ FQGFRSFPID QELPGHFSGD IPVFSMSSYA TSLLHYEE