PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100194980021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

GeBP

Protein Properties

Length: 353aa MW: 39257.9 Da PI: 4.8738

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100194980021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	107.1	1.3e-33	135	230	3	98
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfske 83 ++rlws++Dei++L+G+i+fk+++g+ p +d+ +f++f+k+++++++sk+ql +Ki rLKk+f + kk ++g+e++f+k+ Ote100194980021\|100194980021 135 SNRLWSNDDEIAVLKGMIEFKTTKGVVPNADMAQFHSFIKGKLKVDFSKDQLKSKIVRLKKRFLNALKKGSNGSETVFTKP 215 68***************************************************************************** PP DUF573 84 hdqkifelskkiWgs 98 h+ +fe+skkiWgs Ote100194980021\|100194980021 216 HEVMAFEISKKIWGS 230 ***********95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	2.8E-29	136	229	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence Send to blast
MAPKSSILSH QPSEEEDRDQ SSSSEEAEQS GDESDEAQQN KEENSDETED VTDDEEYAQL 60 PVLKSDWKLI SRQNGSDSDP DSEGSPSDYR LQPIRKGSSS KRTREDDTEI LEFLRGGKSS 120 KSEDKKSASS GAGCSNRLWS NDDEIAVLKG MIEFKTTKGV VPNADMAQFH SFIKGKLKVD 180 FSKDQLKSKI VRLKKRFLNA LKKGSNGSET VFTKPHEVMA FEISKKIWGS VVDGGSNKNA 240 SNKNVKKEIE KVEKDVLIET EAVEKENVGG GGAFWSKYPY LNASFDNVKG AFPGMIAPMG 300 GKSLLLENLS LIGDVKAKEL DDKWKQLRVE EIELSYKILM LMKEQVQLAL DQK

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence Send to blast

MAPKSSILSH QPSEEEDRDQ SSSSEEAEQS GDESDEAQQN KEENSDETED VTDDEEYAQL  60
PVLKSDWKLI SRQNGSDSDP DSEGSPSDYR LQPIRKGSSS KRTREDDTEI LEFLRGGKSS  120
KSEDKKSASS GAGCSNRLWS NDDEIAVLKG MIEFKTTKGV VPNADMAQFH SFIKGKLKVD  180
FSKDQLKSKI VRLKKRFLNA LKKGSNGSET VFTKPHEVMA FEISKKIWGS VVDGGSNKNA  240
SNKNVKKEIE KVEKDVLIET EAVEKENVGG GGAFWSKYPY LNASFDNVKG AFPGMIAPMG  300
GKSLLLENLS LIGDVKAKEL DDKWKQLRVE EIELSYKILM LMKEQVQLAL DQK

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00061	PBM	Transfer from AT4G00270	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011079031.1	1e-102	STOREKEEPER protein
TrEMBL	A0A4D9B4F4	1e-117	A0A4D9B4F4_SALSN; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2369	20	41