PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100196100021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

GeBP

Protein Properties

Length: 194aa MW: 21760.2 Da PI: 10.0224

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100196100021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	38.9	2.4e-12	2	45	45	88
DUF573 45 isfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 +++++k+qlveK+rrLKkK+++ v+k +gke +f+++h+q + Ote100196100021\|100196100021 2 FQLDFNKNQLVEKLRRLKKKYRNVVTKFGTGKEYTFKSPHEQAT 45 5889*************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	7.6E-11	2	44	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence Send to blast
KFQLDFNKNQ LVEKLRRLKK KYRNVVTKFG TGKEYTFKSP HEQATXXXXX XXXXXVAVNG 60 ASAYRAPPAP IEEDDDGMNN PIFNNFVDCQ SPNPNGIDIN SKTPRSRKRN RAGAEMMYNS 120 TNSKGSCCVN GVGMGLGRSP IPLCFGAGIG GGDKVSKERW RKQQILELEV FSKRLELVQD 180 QISEQLQELR SMGN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020552957.1	1e-78	probable transcription factor At3g04930
TrEMBL	A0A4D9B7X4	3e-76	A0A4D9B7X4_SALSN; Uncharacterized protein
STRING	Migut.N01942.1.p	2e-55	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4052	24	45