PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100196490051
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 182aa    MW: 20184.3 Da    PI: 6.7574
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100196490051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.15e-091101451855
                           AP2  18 eIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   eIrdp+   k  r++lg+++t  +Aa+a++ a+ k++g
  Ote100196490051|100196490051 110 EIRDPTR--KGSRVWLGTYDTDVDAARAYDCAAFKIRG 145
                                   7999843..24**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.47992153IPR001471AP2/ERF domain
SMARTSM003801.5E-1592159IPR001471AP2/ERF domain
SuperFamilySSF541712.88E-1493155IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.0E-2093154IPR001471AP2/ERF domain
CDDcd000181.07E-18110153No hitNo description
PfamPF008472.6E-5116145IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MMASSDESLQ LELIRRHLLD DLNYSHYSFD LHFSDSPPSA SDSCSAPNQT VSTFLDSLSD  60
FFEVETRPVS DDICPAKPAP DSMLVSGRGR RGYRGVXXXX XXXXXXXXXE IRDPTRKGSR  120
VWLGTYDTDV DAARAYDCAA FKIRGSKAIL NFPMDAGKLG PPASAGRKRR DKRLNDGCNP  180
CT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-151101542064ATERF1
3gcc_A2e-151101542064ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858579.14e-45PREDICTED: ethylene-responsive transcription factor ERF106
TrEMBLA0A022PWJ91e-43A0A022PWJ9_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.F00526.1.p1e-44(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165