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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Ote100196950031 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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| Family | ZF-HD | ||||||||
| Protein Properties | Length: 192aa MW: 21511.3 Da PI: 8.9094 | ||||||||
| Description | ZF-HD family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | ZF-HD_dimer | 97 | 1.5e-30 | 41 | 95 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
k rYkeClkNhA+ +Ggha+DGCgEf+++ g++gt ++lkCaAC CHRnFHR++ +
Ote100196950031|100196950031 41 KSRYKECLKNHAVGIGGHATDGCGEFIAA-GDDGTLESLKCAACSCHRNFHRKDAA 95
679*************************9.999********************975 PP
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| Protein Features ? help Back to Top | ||||||
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| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Pfam | PF04770 | 7.0E-28 | 42 | 93 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
| ProDom | PD125774 | 5.0E-19 | 43 | 92 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
| TIGRFAMs | TIGR01566 | 2.1E-28 | 43 | 93 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
| PROSITE profile | PS51523 | 26.329 | 44 | 93 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
| Sequence ? help Back to Top |
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| Protein Sequence Length: 192 aa Download sequence Send to blast |
MEYEEDQEEE HEGEIGLAPS YDESTXXXXX XXXXXXXXXX KSRYKECLKN HAVGIGGHAT 60 DGCGEFIAAG DDGTLESLKC AACSCHRNFH RKDAAADGGG GAAFFXXXXX XXXXXXXXXX 120 XXXXXXXXXX XXXXXXXXXX XRRCWRYRRA PAAAAGGRGR TGRSTITILT LAAARRRRDL 180 GRNSARNRRR RC |
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Asterids | OGEA15336 | 4 | 8 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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