PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100200110021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

GeBP

Protein Properties

Length: 126aa MW: 14641 Da PI: 11.216

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100200110021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	63.1	6.6e-20	37	105	2	71
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk 71 +f+r+w+e Dei +LqGl+d+ +++ d+ fy +++ +s ++ksql+eK+rrL+kKf+ +++ Ote100200110021\|100200110021 37 KFHRIWTEPDEIRFLQGLLDCSSQNL-AFPRDLGIFYARFSGTMSQPYTKSQLSEKLRRLRKKFRVISTR 105 799****************77665.6678********************************98887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	6.9E-21	38	107	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 126 aa Download sequence Send to blast
MDSALIQSQN NNLSASKLPI KRKIPHPNPD AVEPPFKFHR IWTEPDEIRF LQGLLDCSSQ 60 NLAFPRDLGI FYARFSGTMS QPYTKSQLSE KLRRLRKKFR VISTRLSKAP LAPGIRRHLA 120 IQWREE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011097448.1	2e-53	uncharacterized protein LOC105176365
TrEMBL	A0A4D8ZI94	2e-53	A0A4D8ZI94_SALSN; Uncharacterized protein
STRING	Migut.K00897.1.p	3e-51	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12822	19	21