PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100205980031
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family GRAS
Protein Properties Length: 66aa    MW: 7301.08 Da    PI: 4.1258
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100205980031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS37.53.4e-122065243288
                          GRAS 243 eqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288
                                   +qe+++n++++l+r+ ++ eyy+alfdsl+a++p+++++r  +E+ 
  Ote100205980031|100205980031  20 HQELNTNTAPLLARVRDTYEYYAALFDSLDATVPSQNSDRLRIEEG 65 
                                   89*****************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS509859.468166IPR005202Transcription factor GRAS
PfamPF035141.2E-92065IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 66 aa     Download sequence    Send to blast
MAANLAILEA AAEDGYSKIH QELNTNTAPL LARVRDTYEY YAALFDSLDA TVPSQNSDRL  60
RIEEGL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851921.14e-18PREDICTED: scarecrow-like protein 8
TrEMBLA0A022QAZ53e-18A0A022QAZ5_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.F00310.1.p9e-20(Erythranthe guttata)