PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100209760021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 251aa    MW: 26685.9 Da    PI: 4.589
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100209760021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.31.4e-072152492559
                                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1  25 kaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                                   +ae++ L++++++L++eN +L+ e+ ++k e+++l
  Ote100209760021|100209760021 215 QAECDDLAQRAESLKEENASLRAEMARIKSEYDQL 249
                                   89******************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165965.5E-2365180No hitNo description
CDDcd147021.36E-6215247No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-5215249No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MTKRESVDVV STVDLRVDDW IQIVDYLTTS SAPGAVLADW SGFHVNVLKN IPWLIDEKSS  60
EGKGKLPIKI SKESLGSLNM IIGKNDEPDK TSGAKPNGVH PKRGESASEG SGEGTDAIEP  120
PQSAPNSSQN EAHGTSHTMV NPAMAMVPIP ASVVWAVSGV PGPTTNLNIR VDYWGTAAPS  180
PGMPAMQGKV PATEVAGEIV ATGSRDNIQS QLWTQAECDD LAQRAESLKE ENASLRAEMA  240
RIKSEYDQLV A
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082307.15e-70bZIP transcription factor 16-like isoform X1
RefseqXP_011082308.15e-70bZIP transcription factor 16-like isoform X1
RefseqXP_011082309.15e-70bZIP transcription factor 16-like isoform X1
RefseqXP_011082310.14e-70bZIP transcription factor 16-like isoform X2
RefseqXP_020550561.14e-70bZIP transcription factor 16-like isoform X2
RefseqXP_020550562.14e-70bZIP transcription factor 16-like isoform X2
SwissprotQ501B24e-43BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A4D8Y7P43e-75A0A4D8Y7P4_SALSN; Plant G-box-binding factor
STRINGXP_008238155.19e-61(Prunus mume)
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]