PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100210250001

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

SAP

Protein Properties

Length: 352aa MW: 40439.5 Da PI: 8.4026

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100210250001	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	436.1	3.1e-133	21	294	78	354
SAP 78 qvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclal 158 +vcstwra+s s+llwq+ltrriW+ +l r tWreeyiyrhrt++nfr+rry ++tl f p+ dn+++ lsCr+la+ Ote100210250001\|100210250001 21 NVCSTWRAISLSELLWQNLTRRIWNTDHLRRRTWREEYIYRHRTSSNFRHRRYLHTTLPFIPT----DNNNNGLSCRRLAI 97 69**********************************************************8....445579****** PP SAP 159 sdkyl...aaGfadGavrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarra 236 s+ f+dGavrlf+l ++lh++tf+pqh drlGrfs++vsGi++sd rlvfatldG+ih a+ dg a+ rra Ote100210250001\|100210250001 98 SEXXXxxxXXXFSDGAVRLFHLPSQLHLTTFYPQHIDRLGRFSSSVSGIILSDVRLVFATLDGNIHAAAFDG--GAPLRRA 176 9865111578*********************************************************9..57* PP SAP 237 llGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretav 317 +GdvvndGalvdf+Gs+rWwvGlyaGvpGrafhiW+++teel f+GG+ltdPeavmGWh+lte+t+l+Grvr+t +e av Ote100210250001\|100210250001 177 NVGDVVNDGALVDFSGSDRWWVGLYAGVPGRAFHIWNGDTEELLFIGGTLTDPEAVMGWHLLTEITDLIGRVRLTTHENAV 257 ***************************************************************************** PP SAP 318 aCtslrlvvfdlrnqgvvlreeeerrGlivssldasn 354 aCt++rl+ fdlrnqgvvl++e+ +rG+ v+++da Ote100210250001\|100210250001 258 ACTNSRLMLFDLRNQGVVLHQEDLHRGVAVGCFDAXX 294 ********************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.1280.50	1.2E-6	21	86	No hit	No description
SuperFamily	SSF81383	2.83E-5	22	64	IPR001810	F-box domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009554	Biological Process	megasporogenesis
GO:0009908	Biological Process	flower development
GO:0030163	Biological Process	protein catabolic process
GO:0046622	Biological Process	positive regulation of organ growth
GO:0005634	Cellular Component	nucleus
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence Send to blast
MQFTQFGEVD EFAIMYSNRD NVCSTWRAIS LSELLWQNLT RRIWNTDHLR RRTWREEYIY 60 RHRTSSNFRH RRYLHTTLPF IPTDNNNNGL SCRRLAISEX XXXXXXXXFS DGAVRLFHLP 120 SQLHLTTFYP QHIDRLGRFS SSVSGIILSD VRLVFATLDG NIHAAAFDGG APLRRANVGD 180 VVNDGALVDF SGSDRWWVGL YAGVPGRAFH IWNGDTEELL FIGGTLTDPE AVMGWHLLTE 240 ITDLIGRVRL TTHENAVACT NSRLMLFDLR NQGVVLHQED LHRGVAVGCF DAXXXXXXXX 300 XXXXXXXADR RPRRRQRASA GRSDGGVQIP RERRECGVRE HWIWSGERGR CD

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence Send to blast

MQFTQFGEVD EFAIMYSNRD NVCSTWRAIS LSELLWQNLT RRIWNTDHLR RRTWREEYIY  60
RHRTSSNFRH RRYLHTTLPF IPTDNNNNGL SCRRLAISEX XXXXXXXXFS DGAVRLFHLP  120
SQLHLTTFYP QHIDRLGRFS SSVSGIILSD VRLVFATLDG NIHAAAFDGG APLRRANVGD  180
VVNDGALVDF SGSDRWWVGL YAGVPGRAFH IWNGDTEELL FIGGTLTDPE AVMGWHLLTE  240
ITDLIGRVRL TTHENAVACT NSRLMLFDLR NQGVVLHQED LHRGVAVGCF DAXXXXXXXX  300
XXXXXXXADR RPRRRQRASA GRSDGGVQIP RERRECGVRE HWIWSGERGR CD

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022861007.1	1e-132	transcriptional regulator STERILE APETALA-like isoform X1
Refseq	XP_022861009.1	1e-132	transcriptional regulator STERILE APETALA-like isoform X2
Swissprot	Q9FKH1	6e-99	SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBL	A0A2G9G769	1e-139	A0A2G9G769_9LAMI; Uncharacterized protein
STRING	Migut.K00325.1.p	1e-124	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4099	23	45

Publications ? help Back to Top
Li N, et al. STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana. PLoS Genet., 2018. 14(2): p. e1007218 [PMID:29401459]