PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100221240021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 245aa    MW: 28000.9 Da    PI: 9.1575
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100221240021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY22.81.9e-07153170219
                                   --SS-EEEEEEE--TT-S CS
                          WRKY   2 dDgynWrKYGqKevkgse 19 
                                    D ++WrKYGqK++k+++
  Ote100221240021|100221240021 153 ADSWAWRKYGQKPIKETT 170
                                   69*************875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.1E-7138169IPR003657WRKY domain
SuperFamilySSF1182903.14E-5145170IPR003657WRKY domain
PROSITE profilePS5081110.923147218IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MDDDDWDLQA VVRGXXXXXX XXXXXXXXXX XTDSNHFPCF DSDLPNHEDP NSFDFSGILD  60
DRNDPFRGLQ EISLPPAAAV PMSRVLQPHQ HVMQVRPPLQ LNMQIQENVQ FNISPNIGSP  120
PQNFSIPQPI RPRRRKNQQM KMVRQMTQEE LSADSWAWRK YGQKPIKETT TGAAPQKAVP  180
PENRWSAAQM IQKSLSSHTP ASTLTHGQLT GAHSPEAPEA NWPLRRPKXX XXXXLAPFYL  240
IKRIR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020548861.13e-47probable WRKY transcription factor 27 isoform X1
TrEMBLA0A0D5Y9907e-52A0A0D5Y990_SALMI; WRKY protein
STRINGMigut.F00276.1.p5e-35(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138601014