PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100221390121

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Trihelix

Protein Properties

Length: 189aa MW: 22232.9 Da PI: 9.9093

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100221390121	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	39.8	1.2e-12	1	47	38	86
trihelix 38 mrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 m+e gf+r+p+qCk+kw+nl +ryk ++++++ + ++ +p++++++ Ote100221390121\|100221390121 1 MSEIGFTRTPVQCKSKWKNLVTRYKGCETMQEIEMRQQ--VFPFYNEMK 47 789*************************99865444..5****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	3.2E-9	1	48	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence Send to blast
MSEIGFTRTP VQCKSKWKNL VTRYKGCETM QEIEMRQQVF PFYNEMKTIF NSRMQRMQCL 60 QEAEGAAATS SPQIPSCDDG GRERKKRKEK RSSSSTKVEG LKEVMEEYMR QQMEMEKQWI 120 KAYXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX VRRDALITAL 180 LNKIGRDGI

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4187	23	43