PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100223590061

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

NAC

Protein Properties

Length: 223aa MW: 25683.8 Da PI: 8.2018

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100223590061	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	62.9	1e-19	10	87	2	94
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 pGfrFhPt+eel+++yLk v gkk + +vi L k +e+ewyfF+++d+k+ +g r+nr+t++g+Wk Ote100223590061\|100223590061 10 LPGFRFHPTEEELLNFYLKSMVFGKKSRG-DVIG-----------LA---KIGEREWYFFVPKDRKHGSGGRPNRTTDNGFWK 77 59**********************877.4443...........43...33789************************ PP NAM 85 atgkdkevls 94 atg+d+++ls Ote100223590061\|100223590061 78 ATGSDRQILS 87 *****986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	13.853	1	141	IPR003441	NAC domain
SuperFamily	SSF101941	1.44E-35	10	122	IPR003441	NAC domain
Pfam	PF02365	3.6E-18	11	104	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence Send to blast
MNESKCELKL PGFRFHPTEE ELLNFYLKSM VFGKKSRGDV IGLAKIGERE WYFFVPKDRK 60 HGSGGRPNRT TDNGFWKATG SDRQILSMAP RGKKTEWIMN EYRLPDKCSA PNDIVLCKVY 120 MKATSLKMLE QRAAMEEGEK KHXXXXXXXX XXXSLQLKNE KEEMVSGEES NEGRPCSSLV 180 LPSSLQNLGE LQVPKLSMDW TQDSFWTQLS PWLDNFIPFV PMC

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-26	3	122	8	168	Stress-induced transcription factor NAC1
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011088680.1	1e-101	NAC domain-containing protein 35
Swissprot	Q10S65	1e-55	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A2G9I7J9	1e-102	A0A2G9I7J9_9LAMI; Uncharacterized protein
STRING	Migut.B00028.1.p	2e-95	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3531	22	48

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]