PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100225920031
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 284aa    MW: 32044.4 Da    PI: 9.995
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100225920031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.22.1e-09239845
                                  HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1  8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                                  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Ote100225920031|100225920031  2 RRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 39
                                  8************************9877777766655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502179.025141IPR004827Basic-leucine zipper domain
SMARTSM003380.002258IPR004827Basic-leucine zipper domain
PROSITE patternPS000360217IPR004827Basic-leucine zipper domain
PfamPF001701.7E-6239IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-7244No hitNo description
SuperFamilySSF579599.64E-7242No hitNo description
PfamPF141443.9E-3182156IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MRRLAQNREA ARKSRLRKKA YVQQLENSRL KLTQLEQELQ RARQQGIFIS NIGDQSHAGS  60
ANGALAFDAE YARWTEEQNK MINELRTAVN AHASDLELRT VVDNVATHFY DVFRLKGNAA  120
KVDVFHILSG MWKTPAERCF MWLGGFRPSE LLKLLANQLE PLTEQQLSGI YNLRESSHQA  180
EDALSQGMDA LQQSLAETLA NGSSGPEGSS GNVANYMGQM AMAMGKLGTL EGFLRQADNL  240
RQQTLQQMHR VLTTRQSARA LLLIHDYFSR LRALSSLWLA RPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075425.10.0transcription factor TGA2.3 isoform X1
RefseqXP_020549044.10.0transcription factor TGA2.3 isoform X2
RefseqXP_020549045.10.0transcription factor TGA2.3 isoform X4
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLX2JIW30.0X2JIW3_SALMI; Transcription factor TGA2
STRINGMigut.J01654.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385