PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100228150091

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

WRKY

Protein Properties

Length: 358aa MW: 38741.4 Da PI: 8.3081

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100228150091	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	31	5e-10	97	117	2	22
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 +D ++WrKYGqK++kgs++pr Ote100228150091\|100228150091 97 SDLWAWRKYGQKPIKGSPYPR 117 699*****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50811	13.242	91	138	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	2.0E-9	93	146	IPR003657	WRKY domain
SuperFamily	SSF118290	3.92E-7	94	118	IPR003657	WRKY domain
SMART	SM00774	3.3E-4	96	158	IPR003657	WRKY domain
Pfam	PF03106	1.9E-5	98	118	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence Send to blast
MLQISPTAKL PLSPPLAAAV SPTGLKGGGG AAPILVPNDH TLISPSNSKG CLVESSLQIS 60 SPRNTGIRRR KSQAKKVVCI PAPAPAGSRP SGEVVPSDLW AWRKYGQKPI KGSPYPRXXX 120 XXXXXXXXXX XXXXXPCLNY YYKCKSFLFH IFFIYTRILA QLATYVADML PLLVIKLKGM 180 LGEEASGAEP NRPEYAGDHL HVGAQPSMAH SEKRSRRLHP ISALEIXXXX XXXXXXXXXX 240 XXXXXXXXXX PKPTNPKEEQ KEIEHAAPSL SSPNSAASYK PTLPESNEDS FFADLGEIEA 300 DSLDLLFTQG FNGRDAKGLD PFTFYDWAAG SENTGGAAAS PASGSGATAS HGESERDT

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence Send to blast

MLQISPTAKL PLSPPLAAAV SPTGLKGGGG AAPILVPNDH TLISPSNSKG CLVESSLQIS  60
SPRNTGIRRR KSQAKKVVCI PAPAPAGSRP SGEVVPSDLW AWRKYGQKPI KGSPYPRXXX  120
XXXXXXXXXX XXXXXPCLNY YYKCKSFLFH IFFIYTRILA QLATYVADML PLLVIKLKGM  180
LGEEASGAEP NRPEYAGDHL HVGAQPSMAH SEKRSRRLHP ISALEIXXXX XXXXXXXXXX  240
XXXXXXXXXX PKPTNPKEEQ KEIEHAAPSL SSPNSAASYK PTLPESNEDS FFADLGEIEA  300
DSLDLLFTQG FNGRDAKGLD PFTFYDWAAG SENTGGAAAS PASGSGATAS HGESERDT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096716.1	4e-50	probable WRKY transcription factor 14