PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100228890041
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family GeBP
Protein Properties Length: 233aa    MW: 26521.5 Da    PI: 9.4039
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100228890041genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57357.92.8e-1846111268
                        DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkk 68 
                                   +f+r+w+e Dei +LqGl+d+  ++      d+  fy  +++ +s  ++ksql+eK+rrL+kKf+ +
  Ote100228890041|100228890041  46 KFHRIWTEPDEIQFLQGLLDCSLQNL-AFPRDLGIFYARFSGTMSQPYTKSQLSEKLRRLRKKFRVE 111
                                   699******************66655.6678*********************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.0E-1847113IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MDSTLIQPHN NNPSSSKLPI KRKXXXXXXX XXXXPDSIAD GTPPFKFHRI WTEPDEIQFL  60
QGLLDCSLQN LAFPRDLGIF YARFSGTMSQ PYTKSQLSEK LRRLRKKFRV EFSPTLPAAT  120
TGFAQENGGS LELLDHGGKD NNGDEFKLRD DASEEKWRQN VDFRCENEIG QVAAKAVRRD  180
TCKFGSKEFF VYTVAALADF ALKSRKLPMK DSCFYAQLSL NLAKIAYTLK ITF
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA128221921