PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100231620051
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family MYB_related
Protein Properties Length: 216aa    MW: 24648.7 Da    PI: 4.5616
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100231620051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.13.4e-0741642448
                                  HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                                  W+ Ia++++ gRt++++k+ w+++l
  Ote100231620051|100231620051 41 WSVIASRLP-GRTDNEIKNVWHTHL 64
                                  *********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.2491564IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.2E-113976IPR009057Homeodomain-like
SuperFamilySSF466892.94E-74072IPR009057Homeodomain-like
CDDcd001672.14E-44164No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MEMEGGPRNP RLKYWTNDFF TLVSYLEAPR PSAAKVREEL WSVIASRLPG RTDNEIKNVW  60
HTHLKKRLTK MSRPEPEARM STTDSSLEGY ANSPTRSSSE VSSATTTTAE SSQHLVQPEM  120
DDSFWSEVLS GNDWGATSDF LTGNSDSLLQ FSASHVASYL DEDENMDFWY NLFNGDEEDI  180
VKLPXXXXXX XXXXXXXXXX XXSREYGIRK QYFVGS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080041.18e-30transcription factor MYB14
TrEMBLA0A2G9G7D23e-35A0A2G9G7D2_9LAMI; Transcription factor, Myb superfamily
TrEMBLW8CJZ82e-35W8CJZ8_SALMI; MYB transcription factor
STRINGXP_010262320.12e-23(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1737334