PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100232550021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 157aa    MW: 18016.1 Da    PI: 9.8114
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100232550021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.58.5e-11136157122
                                   ---SS-EEEEEEE--TT-SS-E CS
                          WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                                   ldDgy+WrKYGqK+vk++++pr
  Ote100232550021|100232550021 136 LDDGYKWRKYGQKVVKNTQHPR 157
                                   59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.8E-12121157IPR003657WRKY domain
SuperFamilySSF1182901.44E-9128157IPR003657WRKY domain
PROSITE profilePS5081113.528131157IPR003657WRKY domain
PfamPF031066.2E-7137157IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MTSATQVMVN QSLFEEQQDM IMSSQLGIFP FIQTNXXXXX XXXXXXXXXG FNQPLKTLDS  60
TDSHFSGLPQ ILSLQRSASN YWALGELSEC MGMKRGGGED DHHLGVSTMK MKKIKARRKV  120
RDPRFCFKTM SDVDVLDDGY KWRKYGQKVV KNTQHPR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100913.28e-54probable WRKY transcription factor 13
TrEMBLA0A4D8Z7B02e-69A0A4D8Z7B0_SALSN; Uncharacterized protein
STRINGEOX923222e-52(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA103762126