PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100235590061
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 104aa    MW: 11219.5 Da    PI: 9.0752
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100235590061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY284.3e-092273459
                                  -EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY 34 vkkkversaedpkvveitYegeHnhe 59
                                  vkk++ers+edp++v++tYeg+H h+
  Ote100235590061|100235590061  2 VKKRIERSSEDPSLVITTYEGQHCHH 27
                                  8**********************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182901.7E-5127IPR003657WRKY domain
PROSITE profilePS5081110.143129IPR003657WRKY domain
PfamPF031066.7E-5227IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-7228IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    Send to blast
MVKKRIERSS EDPSLVITTY EGQHCHHSIG YPRGGQDTAF PRYSNNSYLL YHPTLPPNSP  60
TLQPPTRGGG GPPRATGTVV EEQPTPSGGG LLGDIVPPRM RNNG
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020547655.11e-21probable WRKY transcription factor 57 isoform X1
RefseqXP_020547656.11e-21probable WRKY transcription factor 57 isoform X1
RefseqXP_020547657.11e-21probable WRKY transcription factor 57 isoform X1
SwissprotQ9C9834e-19WRK57_ARATH; Probable WRKY transcription factor 57
TrEMBLA0A4D9BP832e-29A0A4D9BP83_SALSN; Uncharacterized protein
STRINGXP_010470908.11e-20(Camelina sativa)
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Jiang Y,Qiu Y,Hu Y,Yu D
    Heterologous Expression of AtWRKY57 Confers Drought Tolerance in Oryza sativa.
    Front Plant Sci, 2016. 7: p. 145
    [PMID:26904091]
  3. Jiang Y,Yu D
    The WRKY57 Transcription Factor Affects the Expression of Jasmonate ZIM-Domain Genes Transcriptionally to Compromise Botrytis cinerea Resistance.
    Plant Physiol., 2016. 171(4): p. 2771-82
    [PMID:27268959]
  4. Huang KC,Lin WC,Cheng WH
    Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis.
    BMC Plant Biol., 2018. 18(1): p. 40
    [PMID:29490615]