PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100235590101
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family NAC
Protein Properties Length: 195aa    MW: 22476.6 Da    PI: 4.903
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100235590101genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM89.84.9e-28171491128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkya......tgkrk 74 
                                   lp+Gf F+Ptd+el+ +yL +k++g+kl+ + v++  ++++++P++Lp k  +a+e+e +fF+k +               
  Ote100235590101|100235590101  17 LPQGFTFNPTDSELIEFYLIPKLNGQKLPSDYVVDLDNVFEYDPHQLPyKLKYAKENEAFFFTKDEMXXXxxxxxxXXXXX 97 
                                   799***************************66677779**********44444577899***9999888744444344488 PP

                           NAM  75 nratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    rat  gyWk    d +++ +++e++g k+ L f+  ++ +g+ tdW m+e+r 
  Ote100235590101|100235590101  98 IRATPGGYWKVYKDDVNIKGSDEEVIGFKTKLFFH--DNADGNLTDWKMNEFRC 149
                                   899********************************..778889*********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-338171IPR003441NAC domain
PROSITE profilePS5100532.90217172IPR003441NAC domain
PfamPF023656.1E-1618148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MVMASSSNNH SHQELNLPQG FTFNPTDSEL IEFYLIPKLN GQKLPSDYVV DLDNVFEYDP  60
HQLPYKLKYA KENEAFFFTK DEMXXXXXXX XXXXXXXIRA TPGGYWKVYK DDVNIKGSDE  120
EVIGFKTKLF FHDNADGNLT DWKMNEFRCH PTRIPTTSTS MENYIACKIK LRSKNVETTM  180
DGSSDDDNRS NGGNL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-1731691165Stress-induced transcription factor NAC1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1513268