PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100244210041
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family GRAS
Protein Properties Length: 202aa    MW: 22466 Da    PI: 4.7906
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100244210041genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS82.38.5e-262146129280
                          GRAS 129 lqaLasRpeg.ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvl 208
                                   ++aLa R++    +l+iT+v s   ++ ++ eetg+ L++f e++++pf f++l  ++   le  +L+++ +E+++V + +
  Ote100244210041|100244210041   2 IDALARRKGClVKQLKITAVYS---HKLNAEEETGKLLSSFTESMNLPFVFKIL-YSEKGLLEKGDLQLEGDETVVVYMEF 78 
                                   899**99966256********9...5688889*********************6.77789999****************** PP

                          GRAS 209 qlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                                    l   l+ + s     +++L+ +k+ls  v+vvv+ ead   ++F +rf eal   sa+fdsl++ l++es+
  Ote100244210041|100244210041  79 FLVASLACPKS----GEAFLRGLKDLSTSVIVVVDVEADIKVATFTARFKEALVLSSAMFDSLQVCLGQESQ 146
                                   99999955544....556***********************************************9999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098513.6281202IPR005202Transcription factor GRAS
PfamPF035143.0E-232146IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MIDALARRKG CLVKQLKITA VYSHKLNAEE ETGKLLSSFT ESMNLPFVFK ILYSEKGLLE  60
KGDLQLEGDE TVVVYMEFFL VASLACPKSG EAFLRGLKDL STSVIVVVDV EADIKVATFT  120
ARFKEALVLS SAMFDSLQVC LGQESQIDFW REYFSGLGIV EAEQSQVSLY QASLMVRECG  180
RWSGCSLEMN GKSLVIGWNG FR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A4D9A6M68e-60A0A4D9A6M6_SALSN; Uncharacterized protein
TrEMBLA0A4D9BHV92e-56A0A4D9BHV9_SALSN; Uncharacterized protein