PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100244760081

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

FAR1

Protein Properties

Length: 225aa MW: 25651.8 Da PI: 5.3329

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100244760081	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.3	4.7e-27	56	145	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkl 81 +fYn+YA++vGF vr+ + ++s+ +g++ r++ C+k+g++ + k +e+++r++ r gCka++ k+ek+gkw+vt++ Ote100244760081\|100244760081 56 RFYNDYARRVGFVVRVMQRRRSEIDGRTLARRLGCNKQGFSPNAKGLIGSEKKPRPSAREGCKATILFKLEKSGKWVVTRF 136 5*****************************************9999***************************** PP FAR1 82 eleHnHela 90 ++eHnH+l+ Ote100244760081\|100244760081 137 VKEHNHALV 145 *****96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.9E-25	56	145	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence Send to blast
MVEVTAGDSD KEDLNSRDSE EDDLIEAEEK TWSTEGGEAI EPRVGMEFDS EDDARRFYND 60 YARRVGFVVR VMQRRRSEID GRTLARRLGC NKQGFSPNAK GLIGSEKKPR PSAREGCKAT 120 ILFKLEKSGK WVVTRFVKEH NHALVVTAHE YTNVLDKDKR IQELARELQK QEEMCAAYRE 180 RLVNLLSTVE GQSERMSSKI LAVVENVKRA EEEALEEALT LGTNR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011089611.1	1e-117	protein FAR1-RELATED SEQUENCE 2
TrEMBL	A0A4D8ZVZ8	1e-138	A0A4D8ZVZ8_SALSN; Uncharacterized protein
STRING	Migut.N00673.1.p	1e-112	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA11602	20	25