PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100245930021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

NAC

Protein Properties

Length: 282aa MW: 31735.4 Da PI: 4.7365

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100245930021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	87.6	2.2e-27	124	248	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknr 76 +p+Gf+F+Ptdeel++++L+++ +g+ ++ +i++vdiy++eP++L+ ++ ++ ++yf++ +k ++r+ r Ote100245930021\|100245930021 124 VPVGFKFEPTDEELINYFLRAEFDGRAdsSAATGMIRHVDIYEYEPHQLQgLayYYEYGNGKMYFYTWIKKIG--KSRTDR 202 599********************9954344456**********952444444666889999987765..457777 PP NAM 77 atk..sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++k +gyWkat k +++ + +g k+ L+f +++ +kt+W+m ey+l Ote100245930021\|100245930021 203 SIKscKGYWKATHKATPIED-----IGSKTPLTFM---DSNKVKTQWLMYEYKL 248 444349********88.....9****9...455579******97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.14E-27	117	269	IPR003441	NAC domain
PROSITE profile	PS51005	28.149	124	270	IPR003441	NAC domain
Pfam	PF02365	2.7E-16	125	248	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence Send to blast
MDSIFFSLPS FTNGPLRSYS PYPCNGEYST AVDGVVDGEL PAGSGGGDQP EQQVDDYLTA 60 SSVAGYMPLL EGSHASVYEA EEFPATSSSM PEESPATTVS NTQEILLYPV VFEAPTTATK 120 KFNVPVGFKF EPTDEELINY FLRAEFDGRA DSSAATGMIR HVDIYEYEPH QLQGLAYYYE 180 YGNGKMYFYT WIKKIGKSRT DRSIKSCKGY WKATHKATPI EDIGSKTPLT FMDSNKVKTQ 240 WLMYEYKLPK SYYLSHSSSQ ELVLAVIYYH YRRRDGEDTI GN

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-11	118	248	9	140	Stress-induced transcription factor NAC1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15567	7	7