PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100246210141
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 333aa    MW: 37561.2 Da    PI: 11.0489
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100246210141genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.65.6e-07126144221
                           AP2   2 gykGVrwdkkrgrWvAeIrd 21 
                                   +++GVr+++ +g+W+AeIr 
  Ote100246210141|100246210141 126 KFRGVRQRP-WGKWAAEIRX 144
                                   89*******.********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.5E-7126145IPR001471AP2/ERF domain
PROSITE profilePS5103210.586126204IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MRGENAMFSS TKVKYSEHVM QTTVFSKRRR AFPAETPART IRFSVTDGDA TDSSGDEEER  60
LHAKRQRVRR FVNEVRIQPC CRDNPTVAGN ASVSGAVNLT VKSSRRKKSG GGKTQGKLAG  120
VGKGNKFRGV RQRPWGKWAA EIRXXXXXXX XXXXXXXXXX XHLRHGGGGR HGVRPRSHTA  180
AWTRRAHQLL HPGDEGLHNK LRVQLRRGFT PQCEVASVRS PVRLRRKLGR SGXXXXXXXX  240
XXXXXXXXXX XXXXXXXXXX XXXIFPPNDD LFAEFENAAD MFDEMPFRND MLDMGFCNSD  300
FLIGPSTDFG LGPTDDFFHD FGDIFGSDPL VAI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080873.17e-49ethylene-responsive transcription factor CRF2
TrEMBLA0A2G9HGW13e-45A0A2G9HGW1_9LAMI; Uncharacterized protein