PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100254350001
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family YABBY
Protein Properties Length: 100aa    MW: 11717.6 Da    PI: 10.9421
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100254350001genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY27.97.6e-09118119136
                         YABBY 119 PekrqrvPsaynrfikee 136
                                   PekrqrvPsaynrfi +e
  Ote100254350001|100254350001   1 PEKRQRVPSAYNRFINDE 18 
                                   9**************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046902.4E-6118IPR006780YABBY protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007275Biological Processmulticellular organism development
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    Send to blast
PEKRQRVPSA YNRFINDEYF AERRFRGLRL AILKLLTVKL LAQLQKTQVH SIXXXXXXXX  60
XXXXNLFLFA KNDTQWAHLP HIHFGLDKQA KMSHADHAAA