PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100256130001

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 147aa MW: 16646.9 Da PI: 6.0186

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100256130001	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.9	1e-14	32	77	3	53
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 r+h+e+E+rRRdriN +++Lr+l+Pk+ +K++Ka+ L ++ve++k+ Ote100256130001\|100256130001 32 RSHSEAEKRRRDRINAQLATLRKLIPKS-----EKMDKAALLGHVVEHVKE 77 78***********************8.....8************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	9.16E-13	22	79	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.364	29	78	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.59E-10	32	77	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.7E-14	32	77	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.6E-12	32	77	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	8.0E-12	35	86	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 147 aa Download sequence Send to blast
MENFYWPHLQ FTDYDPYLPP PPEEDRAATA SRSHSEAEKR RRDRINAQLA TLRKLIPKSE 60 KMDKAALLGH VVEHVKEQSL RAKEVGKTST IPTEIDEVII DHLNAQESTT SSSQIMYMKA 120 SICCDDRPEF FAEMKSALKG IGATIAE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022887145.1	6e-57	transcription factor bHLH51-like
TrEMBL	A0A2G9GF97	2e-60	A0A2G9GF97_9LAMI; Uncharacterized protein
STRING	Migut.F00663.1.p	1e-51	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5820	22	35