PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100262160061

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

BBR-BPC

Protein Properties

Length: 195aa MW: 21776 Da PI: 4.6813

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100262160061	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	142.6	7.8e-44	1	195	29	237
GAGA_bind 29 mssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla..salp..vgvqvlsgt 105 m++ aerda+irern+al e+k a+aerdma lqrd+a+aern+a+ erd+++ +l +++ s++ s+ p + + sg Ote100262160061\|100262160061 1 MAITAERDAAIRERNMALEERKRAFAERDMAMLQRDAAIAERNAAIQERDEAISSLRYRDSSMNdnSSIPdsLENDFASGG 81 78899***************************************************99998866444411445677888 PP GAGA_bind 106 ksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad.e 185 k ++ qq + l+d+ +++r+++ + ak +k++++++r+++ k++ + +++++ + Ote100262160061\|100262160061 82 KRVHFQQQ--MRSLQDDDIDARDKDGK----------AAKSAKNPRAGKRSAESVIKEEVHSDT------YGLESDEDYlD 144 88886665..45566666664443311..........122222222222222222222222222......12222222213 PP GAGA_bind 186 rskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtt 237 ++ ++k+ +l+ln++++Des++PvPvCsCtG+++ CY+WG+GGWqSaCCtt Ote100262160061\|100262160061 145 KQVVSWKD-NLGLNQINFDESAMPVPVCSCTGSPQPCYRWGSGGWQSACCTT 195 34456665.8***************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF06217	7.9E-41	1	195	IPR010409	GAGA-binding transcriptional activator
SMART	SM01226	2.8E-16	1	195	IPR010409	GAGA-binding transcriptional activator

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence Send to blast
MAITAERDAA IRERNMALEE RKRAFAERDM AMLQRDAAIA ERNAAIQERD EAISSLRYRD 60 SSMNDNSSIP DSLENDFASG GKRVHFQQQM RSLQDDDIDA RDKDGKAAKS AKNPRAGKRS 120 AESVIKEEVH SDTYGLESDE DYLDKQVVSW KDNLGLNQIN FDESAMPVPV CSCTGSPQPC 180 YRWGSGGWQS ACCTT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011099810.1	1e-97	protein BASIC PENTACYSTEINE6
Refseq	XP_011099811.1	1e-97	protein BASIC PENTACYSTEINE6
TrEMBL	A0A2G9GYT6	3e-98	A0A2G9GYT6_9LAMI; Uncharacterized protein
STRING	Migut.H01143.1.p	3e-82	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA8062	22	30