PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100262300021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family G2-like
Protein Properties Length: 178aa    MW: 19897.6 Da    PI: 6.7184
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100262300021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like43.56.9e-141753140
                       G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkg 40
                                  kprl+Wt+eLH+rFveav+qLG   +AtPk+++++ k   
  Ote100262300021|100262300021 17 KPRLKWTSELHQRFVEAVDQLG---EATPKSLMRVQKHLQ 53
                                  79*******************4...79*****99876655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.3E-121555IPR009057Homeodomain-like
TIGRFAMsTIGR015574.8E-101748IPR006447Myb domain, plants
PfamPF143796.9E-104872IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MAVPSKEMRL VLSSDAKPRL KWTSELHQRF VEAVDQLGEA TPKSLMRVQK HLQLRVEAQG  60
KYLQSVLRKA QDTISEYGCC SMEAENARAQ LAELVSMVNT HKQGHHESLE SSLTSSSEGS  120
SCKHQDRNFI SLSLMEMHPP TQAEPEPNQS KRLMLLDLNH LDSGPKLIDL NTTGDGSF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022949008.17e-32myb-related protein 1-like
RefseqXP_023525209.18e-32myb-related protein 1-like
TrEMBLA0A175YIC34e-30A0A175YIC3_DAUCS; Uncharacterized protein
STRINGMigut.L01279.1.p7e-22(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60361932