PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100263260141
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family GRAS
Protein Properties Length: 127aa    MW: 14267 Da    PI: 4.7535
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100263260141genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS29.41e-0980127248
                          GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteA 48 
                                    +lL+ecA a+s ++l +a+++L +ls++asp++ +  +R++ayf++A
  Ote100263260141|100263260141  80 LTLLFECAVAISLDNLGEAHRMLLELSQMASPYAaSCAERVVAYFAKA 127
                                   579******************************97889*******998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS509859.83553127IPR005202Transcription factor GRAS
PfamPF035143.5E-780127IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MHPEEQIINY SANLFSENVG MSKISDRSDQ LSQWVEQITK QLIDDLPENH STDLPRKAAS  60
RKSPDHTHQQ PHEEAEMSLL TLLFECAVAI SLDNLGEAHR MLLELSQMAS PYAASCAERV  120
VAYFAKA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006351691.12e-32PREDICTED: protein SCARECROW-like
TrEMBLM1DDZ65e-31M1DDZ6_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000875049e-32(Solanum tuberosum)