PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100265940011
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WRKY
Protein Properties Length: 158aa    MW: 17296.8 Da    PI: 9.1457
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100265940011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY48.51.7e-151071481959
                                   SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY  19 efprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +  r+YY+C+s  gCp++k+ver+ +d +++++tYe +Hnh 
  Ote100265940011|100265940011 107 PKKRGYYKCSSVrGCPARKHVERALDDLTMLIVTYEADHNHA 148
                                   5679******988****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007743.0E-8105149IPR003657WRKY domain
SuperFamilySSF1182902.09E-12105149IPR003657WRKY domain
PfamPF031061.2E-12106147IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.0E-16106148IPR003657WRKY domain
PROSITE profilePS5081118.521107150IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
EDSSTVSRIV CPAPVQRLPP LPAKNGPIER KESSXXXXXX XXXXXXXXXX XXXXXXXKPS  60
GFQNTNLSQL SSAGRPPLST TSFKRKCSSM DDANAKCGGG SARCHCPKKR GYYKCSSVRG  120
CPARKHVERA LDDLTMLIVT YEADHNHAIS NSESPESS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074403.19e-60probable WRKY transcription factor 7
SwissprotQ9STX02e-26WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA0A2G9I8S92e-59A0A2G9I8S9_9LAMI; Uncharacterized protein
STRINGMigut.N02732.1.p4e-55(Erythranthe guttata)