PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100266090011
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family NF-YB
Protein Properties Length: 167aa    MW: 18812.6 Da    PI: 9.5977
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100266090011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB51.91.8e-16931335797
                         NF-YB  57 ekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                                    krkt+ngdd++wal++lGf+dy e+lk yl +yre+ege+
  Ote100266090011|100266090011  93 XKRKTVNGDDVCWALGSLGFDDYGESLKRYLVRYREAEGER 133
                                   69************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PRINTSPR006152.9E-590108No hitNo description
Gene3DG3DSA:1.10.20.101.6E-1493146IPR009072Histone-fold
SuperFamilySSF471134.96E-1193147IPR009072Histone-fold
PRINTSPR006152.9E-5109127No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MSKSTTCLCI RGSTPYLGAR AASPNRQCGE DHEADPPSQR QNLQRSQRNH AGMRVGVHRL  60
RHRRSLRXXX XXXXXXXXXX XXXXXXXXXX XXXKRKTVNG DDVCWALGSL GFDDYGESLK  120
RYLVRYREAE GERAAAKAEH HLDEAEEGGG GVSPAPFTFN LMEKKGI