PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100268020101
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family BES1
Protein Properties Length: 578aa    MW: 65290.5 Da    PI: 5.1719
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100268020101genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82249.22.1e-15110647131
                        DUF822  47 nneVlkALcreAGwvvedDGttyr...................kgskpl.eeaeaagssasaspesslq.sslkssalasp 106
                                   +n+V++AL+reAGw+ve+DGttyr                   ++ +++ ++a+aag    +s+es+l  s+l++++++s 
  Ote100268020101|100268020101   1 MNDVIAALAREAGWTVEPDGTTYRqtspaplqpqsqplpishfNSIQQNnSNASAAGPNPVRSVESPLYsSALRNCSVRSS 81 
                                   7***********************444433333222222222222222222223333333344444444344555555555 PP

                        DUF822 107 vesysaspksssfpspssldsisla 131
                                   v+ + ++++ ++ +sp+slds+ ++
  Ote100268020101|100268020101  82 VDCQPSTLRVDENMSPASLDSVVAE 106
                                   5555555555555555555555444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.5E-171122IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514459.0E-143147575IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.802.1E-154147575IPR013781Glycoside hydrolase, catalytic domain
PfamPF013739.8E-72172555IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-48205223IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-48227248IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-48320342IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-48393412IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-48427443IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-48444455IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-48462485IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.4E-48500522IPR001554Glycoside hydrolase, family 14
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 578 aa     Download sequence    Send to blast
MNDVIAALAR EAGWTVEPDG TTYRQTSPAP LQPQSQPLPI SHFNSIQQNN SNASAAGPNP  60
VRSVESPLYS SALRNCSVRS SVDCQPSTLR VDENMSPASL DSVVAERDAK LDKYSSASAI  120
NSPECLEPSQ LVQDVHCREH GNGLPETSYV PVYVRLNTGL INNFCQLMDP EGVKEELQHL  180
RSLXXXXXXX XXXXGIVEAW TPKKYEWAGY REIFNIIREF GMKLQVVMAF HEYGGTDASG  240
IFVSLPQWVL EIGKSNQDIF FTDREGRRNT ECLSWGVDKE RVLKGRTGIE IYFDFMRSFR  300
TEFDDLFTEG LISAVEVGLG ASGELKYPSF SERLGWRYPG IGEFQCYDKY LLQNLQKAAK  360
LRGHSFWARG PDNAGFYNSK PHETGFFCDR GDYDSYYGRF FLQWYNQVLI DHADNVLSLA  420
TLAFEDIKIV VKIPAVYWWY KTASHAAELT AGYYNSSNHD GYALLFEVLK KHSVAMKFVL  480
SGFQTSYPEI NEALSDPEGL NWQVLNCGWD RGLSVGGENA EPCYNRDGLM RLVEAAKPRD  540
HPDHLHFSFL VFQQPIQTSV CFSEIDHFVK SMHGELSN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2dqx_A1e-11614857510444Beta-amylase
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00543DAPTransfer from AT5G45300Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082155.10.0beta-amylase 8
SwissprotQ9FH800.0BAM8_ARATH; Beta-amylase 8
TrEMBLA0A4D9BKE80.0A0A4D9BKE8_SALSN; Uncharacterized protein
STRINGMigut.A00486.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16072448
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]