PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100270040171
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family G2-like
Protein Properties Length: 240aa    MW: 27589.3 Da    PI: 8.2121
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100270040171genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like22.72.2e-071421613655
                       G2-like  36 mkvkgLtlehvkSHLQkYRl 55 
                                   + ++gLt+ hvkS LQkYR+
  Ote100270040171|100270040171 142 LAIPGLTIFHVKSYLQKYRM 161
                                   6799***************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF121651.3E-91043IPR021998Alfin
PfamPF121655.6E-54368IPR021998Alfin
Gene3DG3DSA:1.10.10.602.8E-6142162IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0042393Molecular Functionhistone binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MATVSSSPRT VEEIFKDYSA RRGGIVRALT SDVEEFYGLC DPARLNRNER KRLFSLINDL  60
PTVFEVVTDR KSVKDKPNAD SGSKSRIGTK VSSPGNTNKR EFSVEFEKLE TLLILHGLLL  120
ILGSVSDWRS REGNSERYFQ GLAIPGLTIF HVKSYLQKYR MSVFIREEDH TSNHTIRFVT  180
ISFHRLYVVK ECSRLALDPE ESEDENRSTW KMIRVPSFNL DLFPLDGISK NLYAEQEMVQ