PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100270430041

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 193aa MW: 21685.4 Da PI: 7.3713

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100270430041	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.4	1.7e-05	164	189	5	30
HHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 5 hnerErrRRdriNsafeeLrellPka 30 + + +r RR ri ++++ L+el+P++ Ote100270430041\|100270430041 164 AYATDRCRRLRISHWLDALQELVPHP 189 56789*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence Send to blast
MEEQNRINDL QLSPLGIDCM ASSASGLLNN FDYDRRCIMA SGSGVGLAPA SVHQWICCEP 60 MPQNYVQFLA ETGYPDIQKE MFYDISAQLP NLGLSNPSQL EECPRLHNGR DFVTTFASTE 120 QLGVRERQKR KEESSRAYGS FSKSGAAATK DPSKVNRKRS KERAYATDRC RRLRISHWLD 180 ALQELVPHPE GVT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011079825.1	2e-54	uncharacterized protein LOC105163244 isoform X1
Refseq	XP_020550205.1	2e-54	transcription factor bHLH66-like isoform X2
Refseq	XP_020550207.1	9e-55	transcription factor bHLH66-like isoform X4
TrEMBL	A0A0H3Y7N0	5e-74	A0A0H3Y7N0_SALMI; Basic helix-loop-helix transcription factor
STRING	Migut.D00274.1.p	7e-52	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA9646	16	17