PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100275780041
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 240aa    MW: 26724.2 Da    PI: 6.7962
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100275780041genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-08133180455
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   +h+ +Er RR++iN+++  L++l+P +     k +  a +L   ++Y++sLq
  Ote100275780041|100275780041 133 SHSLAERLRREKINDKLRCLQDLVPGC----YKTMGMAVMLDVIINYVRSLQ 180
                                   8*************************8....355888888999999988887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.49E-16127197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.05E-11127183No hitNo description
PROSITE profilePS5088815.218129179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-15129190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-6133180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-7135185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:2000488Biological Processpositive regulation of brassinosteroid biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MNSSPNILNN MANFEGFNMN YNGIMSSSNN EFSDHHPISY DDQVLRSSGP VFDPMMPHFF  60
PSNNMSMMPE AEILVNSSPS VSGAAFLGPH EVYKNLQQQN LGGKKRKRAS EREIQKPKDV  120
VHVRAKRGQA TDSHSLAERL RREKINDKLR CLQDLVPGCY KTMGMAVMLD VIINYVRSLQ  180
NQIDFLSMKL SAASLFYDFN SSEAEAMEAL QGTSGYEGGK EKVVGEGYGG ISQFQPAAWP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078318.21e-104transcription factor bHLH75
TrEMBLA0A4D9AG671e-101A0A4D9AG67_SALSN; Uncharacterized protein
STRINGMigut.L01053.1.p1e-102(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA90691724