PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100277900011

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

GeBP

Protein Properties

Length: 251aa MW: 27725.6 Da PI: 9.5191

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100277900011	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	57.1	5.3e-18	1	57	41	97
DUF573 41 vkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +k++ +++++k+qlveK+rrLKkK+++ +k +gke +f+++h+q +fe+s+kiWg Ote100277900011\|100277900011 1 IKSKFQLDFNKNQLVEKLRRLKKKYRNVISKFGNGKEYTFKSPHEQATFEISSKIWG 57 68999***************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	1.3E-17	1	57	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence Send to blast
IKSKFQLDFN KNQLVEKLRR LKKKYRNVIS KFGNGKEYTF KSPHEQATFE ISSKIWGNVA 60 VNGASAYRAP PAPIDEDDDN NPNFVDCQSP NLNGIDINSK TPRSRKRNRA GAMKMEEKQF 120 NTPNINISNA QPVTAVPPAV AAPVIGVGIT GSLSSVIEET VKSCLSPIFK ELLCNSMSPN 180 LNTNASCCGN GLALGRSPLP FCLGTAITGD KVSNERWRKQ QILELEVFSK RLELVQDQIS 240 EQLQELRSMG N

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020552957.1	1e-125	probable transcription factor At3g04930
TrEMBL	A0A4D9B7X4	1e-142	A0A4D9B7X4_SALSN; Uncharacterized protein
STRING	Migut.N01941.1.p	1e-103	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4052	24	45