PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote234846540001
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 120aa    MW: 13176.9 Da    PI: 8.9455
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote234846540001genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67.2e-1158104455
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   ah+++ r+RR ri ++ +eL +l+P       +K++ ae+L+ A +YIk Lq
  Ote234846540001|234846540001  58 AHSAAARQRRWRITEKTQELGKLVPGG-----QKMNTAEMLQSAYKYIKFLQ 104
                                   8************************86.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.64354103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-1456114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.39E-1157108No hitNo description
Gene3DG3DSA:4.10.280.101.6E-1457118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-858104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.8E-1060109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
KRQKCCDSDQ IHSSFFPPNP CLADYLPPPF LDFPAAGYSN GSCESARSEA SPAGNLSAHS  60
AAARQRRWRI TEKTQELGKL VPGGQKMNTA EMLQSAYKYI KFLQAQVSLL ESVNGLNNKV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022847717.12e-33transcription factor bHLH53-like
TrEMBLA0A2G9G0223e-34A0A2G9G022_9LAMI; Uncharacterized protein
STRINGMigut.M01923.1.p2e-32(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38562246