PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote237827590001

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

SAP

Protein Properties

Length: 128aa MW: 14118.9 Da PI: 5.1413

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote237827590001	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	168.8	3.6e-52	1	127	325	454
SAP 325 vvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrgaqrgvlgCvnggyalvyaggv 405 +vf+l+ qgv+l++ee+rrG++v+s+da n+a++++d rG+atvrrv n+eevcrf++rg + lgC+nggya++++ggv Ote237827590001\|237827590001 1 MVFHLQHQGVILEDEEFRRGIVVGSFDAFNDAALILDARGTATVRRVGNMEEVCRFTMRG--GASLGCINGGYAVTWGGGV 79 79*******************************************************6..478************ PP SAP 406 lrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454 +rv++ie+ ylys+ er++e+ al+ad+r+va++s+d+tihl+dfga Ote237827590001\|237827590001 80 IRVYDIEHGR-YLYSFGERIEECSALIADQRYVAACSADATIHLWDFGA 127 ****77.***********************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF50978	1.35E-8	34	125	IPR017986	WD40-repeat-containing domain
Gene3D	G3DSA:2.130.10.10	2.6E-7	68	125	IPR015943	WD40/YVTN repeat-like-containing domain
PROSITE pattern	PS00678	0	111	125	IPR019775	WD40 repeat, conserved site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 128 aa Download sequence Send to blast
MVFHLQHQGV ILEDEEFRRG IVVGSFDAFN DAALILDARG TATVRRVGNM EEVCRFTMRG 60 GASLGCINGG YAVTWGGGVI RVYDIEHGRY LYSFGERIEE CSALIADQRY VAACSADATI 120 HLWDFGAH

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009596786.1	1e-47	PREDICTED: transcriptional regulator STERILE APETALA-like
Refseq	XP_016468216.1	1e-47	PREDICTED: transcriptional regulator STERILE APETALA-like
Swissprot	Q9FKH1	3e-34	SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBL	A0A1S3ZUZ2	2e-46	A0A1S3ZUZ2_TOBAC; transcriptional regulator STERILE APETALA-like
STRING	XP_009596786.1	4e-47	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA21819	2	2

Publications ? help Back to Top
Li N, et al. STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana. PLoS Genet., 2018. 14(2): p. e1007218 [PMID:29401459]