PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote237874790011

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

EIL

Protein Properties

Length: 210aa MW: 23435.4 Da PI: 4.1126

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote237874790011	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	42.4	1.6e-13	1	105	224	353
HHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXX CS EIN3 224 irelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqavkttagf 304 +r+l+ qsk+lq+km+ak+s+++++v+nqee +++ l ++++++s ++ e+ e++++ +++ Ote237874790011\|237874790011 1 MRRLVNQSKSLQHKMTAKDSATWAKVVNQEEVLME--------L--TNKSLKISANDGENEETDNA------------RSI 59 89**************************98662........3..45666676664432222222............357 PP XXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 305 pvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 +v +krk + ++ + + cq++++++ e++f dkns++++e Ote237874790011\|237874790011 60 EVGDKRKCTF---ESGRRPDLLYACQNEECPETAAEAGFVDKNSRTDHE 105 8999999333...333334568**********************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF116768	6.41E-7	1	34	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain
Gene3D	G3DSA:1.10.3180.10	5.0E-9	1	37	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence Send to blast
MRRLVNQSKS LQHKMTAKDS ATWAKVVNQE EVLMELTNKS LKISANDGEN EETDNARSIE 60 VGDKRKCTFE SGRRPDLLYA CQNEECPETA AEAGFVDKNS RTDHEAVCAY RGINGGDENG 120 QEPNHEKQLN LCDWLNAPYE IVFNEDQIDG GGEASSDSSN VKSGNYWEED AMENVNMDPN 180 GIAIARSIEE FSNGDPAFSI WDLAYQEITD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
STRING	Gorai.003G043500.1	5e-32	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA304	23	178