PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote237990030051

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

ARR-B

Protein Properties

Length: 504aa MW: 56173.8 Da PI: 5.6041

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote237990030051	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.5	8.3e-25	192	246	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr +Wt+e+He+F+ ave+LGG++ A P i+++m+v+gL++ehv+SHLQkYRl Ote237990030051\|237990030051 192 RPRFNWTNEMHEKFLIAVESLGGPKPAYPNMIVKHMGVPGLSREHVASHLQKYRL 246 59****************************************************8 PP
2	Response_reg	26	4.7e-10	27	108	1	82
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekd.pDlillDiempgmdGlellkeireeepklpiivvt 78 +l+v D+++ ++ ++++l++ y +v ++ + +al+ + k+ d +Dl+++ +++Gl+++++i+++ kl+++ ++ Ote237990030051\|237990030051 27 ILVVNDDQACQSSVAKVLRHCSY-QVLHTGTVYDALHAIweKK-DrIDLVITNAHKLKSEGLAIIQNIEQKL-KLNVLHMS 104 89*******************.8888888888887774444.46********************8865.89998888 PP STTT CS Response_reg 79 ahge 82 + Ote237990030051\|237990030051 105 NDQR 108 6655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF52172	8.68E-7	22	139	IPR011006	CheY-like superfamily
Gene3D	G3DSA:3.40.50.2300	6.7E-9	26	112	No hit	No description
Pfam	PF00072	2.9E-5	27	114	IPR001789	Signal transduction response regulator, receiver domain
PROSITE profile	PS51294	10.927	189	249	IPR017930	Myb domain
SuperFamily	SSF46689	1.22E-15	190	250	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.7E-23	190	250	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	7.8E-19	193	246	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000160	Biological Process	phosphorelay signal transduction system
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence Send to blast
MYLHQYREGS SMYSEVDAGE DIISIGILVV NDDQACQSSV AKVLRHCSYQ VLHTGTVYDA 60 LHAIWEKKDR IDLVITNAHK LKSEGLAIIQ NIEQKLKLNV LHMSNDQRIE PKGELFSFSA 120 YELNGLSITG FYNLLENARL MEDDKMAAKN FDRASISDAA AETNKASSSI DDEVRLNQKR 180 KAAESYGRNK KRPRFNWTNE MHEKFLIAVE SLGGPKPAYP NMIVKHMGVP GLSREHVASH 240 LQKYRLVVKN MRNEVQGIGD LTSPTASRLA SFWMNLTAFP HIPALEESKL QYTSRSSFCS 300 TPGRKFYPRF RVSHLNDDRG GVDGLRNTTP FRNESSSCSK FVGFRFDGKK IYYGPIKKDA 360 LFSGPEGSES QSASYAEHTG SILQQSCLLG SPSGETAARE PDSISSNALE IYAATTSSMF 420 APRPHQDLLL QPLEAGGNGF TEQSGYAFDD DALQAPQSPQ MFQDLDEIFN QSGKEDDILI 480 NGIENACHQL DFLDLDDTFF SEGD

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence Send to blast

MYLHQYREGS SMYSEVDAGE DIISIGILVV NDDQACQSSV AKVLRHCSYQ VLHTGTVYDA  60
LHAIWEKKDR IDLVITNAHK LKSEGLAIIQ NIEQKLKLNV LHMSNDQRIE PKGELFSFSA  120
YELNGLSITG FYNLLENARL MEDDKMAAKN FDRASISDAA AETNKASSSI DDEVRLNQKR  180
KAAESYGRNK KRPRFNWTNE MHEKFLIAVE SLGGPKPAYP NMIVKHMGVP GLSREHVASH  240
LQKYRLVVKN MRNEVQGIGD LTSPTASRLA SFWMNLTAFP HIPALEESKL QYTSRSSFCS  300
TPGRKFYPRF RVSHLNDDRG GVDGLRNTTP FRNESSSCSK FVGFRFDGKK IYYGPIKKDA  360
LFSGPEGSES QSASYAEHTG SILQQSCLLG SPSGETAARE PDSISSNALE IYAATTSSMF  420
APRPHQDLLL QPLEAGGNGF TEQSGYAFDD DALQAPQSPQ MFQDLDEIFN QSGKEDDILI  480
NGIENACHQL DFLDLDDTFF SEGD

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3659	16	20