PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1000401g006
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 193aa    MW: 22107.3 Da    PI: 8.7529
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1000401g006genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM22.62.8e-078815854128
                 NAM  54 eek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                         +++   y++++ +++ +t+kr+      gyW+  g++ +  + ++++v  ++ + f  +g+ p+    +Wvm ey+l
  PDK_30s1000401g006  88 KSSgVSYYYVECAENLKTEKRQVA-DGIGYWQRFGREIADGH-GSNAVMYRQAFKFIpRGDGPR----TWVMTEYTL 158
                         233245999999998887666655.578*******9665555.8899**********6666666....7******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-590163IPR003441NAC domain
PfamPF023651.8E-493158IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MNDADKHESL FDLYVHTFVM LSFSEERADL SIPRIFYINL QGLLTMILIA LQEVLLTNTQ  60
GDSGRHHFPL NIPSLSSVGV AKATCDRKSS GVSYYYVECA ENLKTEKRQV ADGIGYWQRF  120
GREIADGHGS NAVMYRQAFK FIPRGDGPRT WVMTEYTLRP NKSGKNKRFL VLLLDSKHNY  180
VYLTRCISLS WVE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026665597.13e-55uncharacterized protein LOC113463605
TrEMBLA0A3Q0IK557e-54A0A3Q0IK55_PHODC; uncharacterized protein LOC113463605