PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s1000401g007

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

NAC

Protein Properties

Length: 141aa MW: 16481.5 Da PI: 9.6369

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s1000401g007	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	67.1	5e-21	4	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvkaeekewyfFskrdkkyatgk..rknr.atksgyWka 85 lppG+rF+Ptd+e+v + v g++l+ +i + d+ ++ +P+d + + ++y++++ k+ +g+ r +r + +g+Wk+ PDK_30s1000401g007 4 LPPGVRFQPTDQEIVLYLCYYAVFGQPLDN-GFIMNGDLRYFqveQPQDVR-----SLGRLYYYTNCFYKQVRGRptRDRRtVDGKGRWKS 88 79***********666666788888888.77877777766334688886.....234678887777766654332888845569* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkge.ktdWvmheyrl 128 t +k++++ ++e g k+ + f + +a+ ge +t+Wvm ey+l PDK_30s1000401g007 89 TDGQKTIYQ-SSEIAGYKQNFRFRRLTASGGEvSTTWVMTEYTL 131 *****.999*******9888877659******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.75E-26	2	138	IPR003441	NAC domain
PROSITE profile	PS51005	23.269	4	141	IPR003441	NAC domain
Pfam	PF02365	5.1E-14	5	131	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence Send to blast
MEGLPPGVRF QPTDQEIVLY LCYYAVFGQP LDNGFIMNGD LRYFQVEQPQ DVRSLGRLYY 60 YTNCFYKQVR GRPTRDRRTV DGKGRWKSTD GQKTIYQSSE IAGYKQNFRF RRLTASGGEV 120 STTWVMTEYT LHSNKSNNNN M

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
STRING	XP_008780765.1	3e-86	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP21061	2	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	5e-17	NAC domain containing protein 38