PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1025991g003
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 206aa    MW: 22987.8 Da    PI: 6.5079
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1025991g003genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.32e-1212918573128
                 NAM  73 rknr.atksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128
                         r++r    sg+Wka+ k +++l+ +g+++g k+ + fy+g +++++++t+Wvm ey+l
  PDK_30s1025991g003 129 RSRRtLDGSGFWKAKDK-RPILEDGGTVIGYKQYFRFYEGpSHSNSNSTKWVMTEYTL 185
                         667734569****9977.999999***************98888999*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100511.45865206IPR003441NAC domain
SuperFamilySSF1019411.57E-13121191IPR003441NAC domain
PfamPF023651.6E-7129185IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MASCHHNQEK HTQERKKGEE TLEVGDRAGV LDDGVADGVD PLLLLLLGVG NPRWECWTME  60
RLMELKPSVP FTAGPHGKVE EEVELTRSCS SCLGPRAETV RASLIFVGDG IVTDVSRNGS  120
CYYTDLRPRS RRTLDGSGFW KAKDKRPILE DGGTVIGYKQ YFRFYEGPSH SNSNSTKWVM  180
TEYTLPPDTS HGTRISTLPH EPNLHS
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2942824
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12910.12e-06NAC family protein