PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s1045641g002

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

NAC

Protein Properties

Length: 158aa MW: 18602.2 Da PI: 10.1527

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s1045641g002	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	117.8	1.1e-36	11	135	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +pG +F+P +elv +yL++++ +++l+ ++ike+++y+++P+d+ + + k++yfF++r+kky++g+ + r tk gyWka+gkd+ + PDK_30s1045641g002 11 APGHHFRPFPKELVEFYLRPRLLNQPLPN-QAIKELNLYDFHPRDILGN-TPPGKHLYFFTPRKKKYPNGTMPARGTKGGYWKASGKDTII 99 69***********************99.88**********743.345789******************************* PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +k +++g kk+Lvf++g++++g++t+W+m+ey++ PDK_30s1045641g002 100 RNKYANEIGRKKSLVFHEGHQRNGTRTRWLMQEYTI 135 99****************************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	6.67E-38	9	136	IPR003441	NAC domain
PROSITE profile	PS51005	37.853	10	156	IPR003441	NAC domain
Pfam	PF02365	2.5E-19	12	135	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence Send to blast
MEEDEGIGNV APGHHFRPFP KELVEFYLRP RLLNQPLPNQ AIKELNLYDF HPRDILGNTP 60 PGKHLYFFTP RKKKYPNGTM PARGTKGGYW KASGKDTIIR NKYANEIGRK KSLVFHEGHQ 120 RNGTRTRWLM QEYTIKEFWF PTNQNKDEGP CHYVDKIF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	3e-26	9	135	14	140	Stress-induced transcription factor NAC1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008807606.1	1e-106	NAC transcription factor 32-like
TrEMBL	A0A2H3Z3D5	1e-105	A0A2H3Z3D5_PHODC; NAC transcription factor 32-like
STRING	XP_008807606.1	1e-106	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13130	21	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-26	NAC domain containing protein 35