PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s1046841g003

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

CPP

Protein Properties

Length: 726aa MW: 78878.5 Da PI: 7.3783

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s1046841g003	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	28.9	2.2e-09	338	366	14	42
TCR 14 lkkYCeCfaagkkCseeCkCedCkNkeek 42 +k YC+Cfaag+ C++ C C++C+N++e+ PDK_30s1046841g003 338 KKSYCDCFAAGTLCTKACACQECFNRSEH 366 699**********************9886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	8.3E-4	330	366	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	14.267	331	420	IPR005172	CRC domain
Pfam	PF03638	8.0E-6	338	363	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence Send to blast
MDVCKVEGHG ILFSVRSNND ESKKWNDGCG EVIRRCKVDP ISIALGLELE PVLINQNLVP 60 LLGIQYGEGE EEAYCVNRLA CSGYLKGLAR KHSGLGSRFF FGSEGTQHQR GTRKHLQFEA 120 VCIGNSRNST NDVSNAESPA TPLNMGTISA SYAESAATSS NKQSVQSFSG NFLCRLLLKI 180 DSSGQKKGSF PARAPKPSGV GFHLNSIGSS GSINCNVNMH DTSFRGQKSH SGGNSEVSQE 240 LKNHLASTSL KGQDSAILTV ILENNFANGN SEEQNLENQE IKLPNSSVSY QPPLDAKPLQ 300 SSLQPKFIDH YMLSCNMKRP LSDGASSSME STQTCPGKKS YCDCFAAGTL CTKACACQEC 360 FNRSEHEDTV HAARQQIESR NPLAFAPKVV LQVTNPLKDD GAGVGCSFGC RCEGCKNTFG 420 RKDAIPINPL AQESRRICLL SRGCLLDDVY DEVFLDIGLY RHRSPADGCG EIIEIEHKKL 480 EGSWESDPSC AILEGIDLKR EAVVSTNQRR SHLSPDTPSI LGQSGSDVPR SHFPARYYAS 540 RESSASSLPY YGGSPSPPVD LMSNNASERA GEKTLPLVPD YQEPECRPSA VEVEPFSHGW 600 GGFPDVCNPW PNPSSARCVS VASKIRRPKI LQIKLFQGSA RLSEGSLCWR SSPATPPPPL 660 GESRLVVEPD SGSGVHDNPE DDDTPEVLKD NRKAAMARSP KQKRGAGSFS FKVAICVFHQ 720 KRRYSY

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence Send to blast

MDVCKVEGHG ILFSVRSNND ESKKWNDGCG EVIRRCKVDP ISIALGLELE PVLINQNLVP  60
LLGIQYGEGE EEAYCVNRLA CSGYLKGLAR KHSGLGSRFF FGSEGTQHQR GTRKHLQFEA  120
VCIGNSRNST NDVSNAESPA TPLNMGTISA SYAESAATSS NKQSVQSFSG NFLCRLLLKI  180
DSSGQKKGSF PARAPKPSGV GFHLNSIGSS GSINCNVNMH DTSFRGQKSH SGGNSEVSQE  240
LKNHLASTSL KGQDSAILTV ILENNFANGN SEEQNLENQE IKLPNSSVSY QPPLDAKPLQ  300
SSLQPKFIDH YMLSCNMKRP LSDGASSSME STQTCPGKKS YCDCFAAGTL CTKACACQEC  360
FNRSEHEDTV HAARQQIESR NPLAFAPKVV LQVTNPLKDD GAGVGCSFGC RCEGCKNTFG  420
RKDAIPINPL AQESRRICLL SRGCLLDDVY DEVFLDIGLY RHRSPADGCG EIIEIEHKKL  480
EGSWESDPSC AILEGIDLKR EAVVSTNQRR SHLSPDTPSI LGQSGSDVPR SHFPARYYAS  540
RESSASSLPY YGGSPSPPVD LMSNNASERA GEKTLPLVPD YQEPECRPSA VEVEPFSHGW  600
GGFPDVCNPW PNPSSARCVS VASKIRRPKI LQIKLFQGSA RLSEGSLCWR SSPATPPPPL  660
GESRLVVEPD SGSGVHDNPE DDDTPEVLKD NRKAAMARSP KQKRGAGSFS FKVAICVFHQ  720
KRRYSY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026659272.1	0.0	uncharacterized protein LOC103703858
TrEMBL	A0A3Q0I132	0.0	A0A3Q0I132_PHODC; uncharacterized protein LOC103703858
STRING	XP_008785101.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP20767	5	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	5e-25	TESMIN/TSO1-like CXC 2