PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s1048631g002

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

Dof

Protein Properties

Length: 248aa MW: 26761.6 Da PI: 5.2628

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s1048631g002	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	60.1	4.4e-19	1	33	29	61
zf-Dof 29 PryfCkaCrryWtkGGalrnvPvGggrrknkks 61 PryfCk+CrryWtkGG+lrnvP Ggg+rkn++ PDK_30s1048631g002 1 PRYFCKGCRRYWTKGGSLRNVPAGGGCRKNRRG 33 9*****************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	17.718	1	32	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	9.6E-14	1	32	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-12	1	32	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence Send to blast
PRYFCKGCRR YWTKGGSLRN VPAGGGCRKN RRGKSVRLST VAASDLSYGR RLSGQIRPDL 60 ALDGMVGNSS SSLQSMDAST ATDGSTIDLA SLYAKFLNQH PEVEPGLAVP ELPRGIDEPF 120 DSSGGQSDTN WNQQTPVQLP HQHRLMGCQS ASEPVAEAPL AHGNQQSIGE HNLPVDPSGC 180 ESPAFPTEGV SSFFSSSCPI IPNLTCEAAN YQGFGSLQLE DSMSLHQNLV VNDWSTMDYS 240 SLEAFYWS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008779883.1	0.0	dof zinc finger protein DOF3.5-like
TrEMBL	A0A2H3X8G8	0.0	A0A2H3X8G8_PHODC; dof zinc finger protein DOF3.5-like
STRING	XP_008779883.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2659	36	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	3e-20	Dof family protein