PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s1064791g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

NAC

Protein Properties

Length: 127aa MW: 14796.4 Da PI: 8.6172

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s1064791g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	50.9	5.2e-16	8	81	56	128
NAM 56 kewyfFskrdkkyat.gkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k+ yfF+k dk++++ ++r +r+ + g W + dk+vl+ ++ + g+ ktL++y+g+ ++ +kt W+m eyrl PDK_30s1064791g001 8 KSRYFFTKLDKRSKNkKHRDRRVKNGGHWICSAGDKPVLTDgGQYTGGVYKTLTYYEGNGRS-KKTGWIMIEYRL 81 567***99998873667788999**********9844455899***999887.8*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	24.35	1	106	IPR003441	NAC domain
SuperFamily	SSF101941	7.72E-20	9	106	IPR003441	NAC domain
Pfam	PF02365	2.7E-8	10	81	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 127 aa Download sequence Send to blast
RFPISRIKSR YFFTKLDKRS KNKKHRDRRV KNGGHWICSA GDKPVLTDGG QYTGGVYKTL 60 TYYEGNGRSK KTGWIMIEYR LSKESKQHQP TANLGSDWVL CEIYYKENIA EDDEASDDYS 120 EEDNEAE

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	3e-12	8	111	71	170	NO APICAL MERISTEM PROTEIN
1ut4_B	3e-12	8	111	71	170	NO APICAL MERISTEM PROTEIN
1ut7_A	3e-12	8	111	71	170	NO APICAL MERISTEM PROTEIN
1ut7_B	3e-12	8	111	71	170	NO APICAL MERISTEM PROTEIN
3swm_A	3e-12	8	111	74	173	NAC domain-containing protein 19
3swm_B	3e-12	8	111	74	173	NAC domain-containing protein 19
3swm_C	3e-12	8	111	74	173	NAC domain-containing protein 19
3swm_D	3e-12	8	111	74	173	NAC domain-containing protein 19
3swp_A	3e-12	8	111	74	173	NAC domain-containing protein 19
3swp_B	3e-12	8	111	74	173	NAC domain-containing protein 19
3swp_C	3e-12	8	111	74	173	NAC domain-containing protein 19
3swp_D	3e-12	8	111	74	173	NAC domain-containing protein 19
4dul_A	3e-12	8	111	71	170	NAC domain-containing protein 19
4dul_B	3e-12	8	111	71	170	NAC domain-containing protein 19

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	15	23	LDKRSKNKK
2	17	23	KRSKNKK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008780245.2	2e-75	NAC domain-containing protein 83-like
TrEMBL	A0A2H3X9A1	4e-74	A0A2H3X9A1_PHODC; NAC domain-containing protein 83-like
STRING	XP_008780245.1	1e-74	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP29426	2	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	8e-15	NAC domain containing protein 2