PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s1089221g015

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

Dof

Protein Properties

Length: 329aa MW: 36321.4 Da PI: 5.0184

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s1089221g015	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.2	1.6e-37	59	112	7	60
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 cprCds+ntkfCyynnysl+qPryfCk+CrryWtkGG lrnvPvGgg+rkn++ PDK_30s1089221g015 59 ICPRCDSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGNLRNVPVGGGCRKNRR 112 6***************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-27	43	112	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.668	58	112	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	8.3E-32	59	112	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	60	96	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence Send to blast
MAYVLDPMHM RMHMGDRVPT DREPAFTLAL MLSRVLPYPL RRSLVAHHSW KPDNELAPIC 60 PRCDSSNTKF CYYNNYSLTQ PRYFCKGCRR YWTKGGNLRN VPVGGGCRKN RRGVSARPQA 120 NHPASQSDLN YDSHGLPDSC RSNHAQHDGM PGSSHHSKNS DLPPSDGSTM DLALPELPGE 180 IMDEPFVSVM EGATNSAMNQ MPGQGLNQLG GREITENEPF VSVMEGAPNS AMNQMPGQGL 240 NQLGGREITE ALFENQTYAD DSNFSLDPGS SESVAFSSEG GVTGYDIPVS DCWVAPPTCP 300 GFQPLLEDDL FHHQDLVIGD WYSLDQFYS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008799722.1	0.0	dof zinc finger protein DOF3.5-like
TrEMBL	A0A2H3YJW9	0.0	A0A2H3YJW9_PHODC; dof zinc finger protein DOF3.5-like
STRING	XP_008799722.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2659	36	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	2e-35	Dof family protein