PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1095741g013
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 495aa    MW: 53149.3 Da    PI: 6.914
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1095741g013genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.26.4e-22353415163
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         e+elkrerrkq+NRe+ArrsR+RK+ae+eeL+ kv++L aeN+aL++e+++l++++++l+ e+
  PDK_30s1095741g013 353 ERELKRERRKQSNRESARRSRLRKQAETEELAMKVETLGAENMALRSEISRLSEKSDNLRLEN 415
                         89********************************************************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077775.4E-13178IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165966.6E-9245338No hitNo description
Gene3DG3DSA:1.20.5.1702.6E-16350412No hitNo description
PfamPF001704.8E-20353415IPR004827Basic-leucine zipper domain
SMARTSM003387.5E-21353417IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.059355418IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.75E-10356411No hitNo description
CDDcd147028.80E-23358409No hitNo description
PROSITE patternPS000360360375IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 495 aa     Download sequence    Send to blast
MGNDEAGTPP KSDKASSSMQ KAISPYLRFI EPVLGIVPTG DWFGMAYYGP GVAMPHPFFS  60
TSVAPGHAPN PYLWGPQDSG DASFMEAFHV PGEGMAVQHN TTQARTDPCR QATNPEPGTG  120
TADHTINTGK RPGIGYPMHK WFLQGTLPQY RAPYQCHTLS MVRYGVGSAY RVSPLMPPPF  180
GMPYAAIYPP AGVYSHPPMP LDSKYILGSH MQCQGMTPSP TISETVVMTT PLSTEMPAKS  240
PSNKDKGLMK KLKRFDGLAV SAGNGDAESR GGDRNGSSQS EDDSVEGLSD GSDGNNAGGN  300
KTRGKQSSKD IRGPGDGKVD PQTNAAHGVE TSASSKMSLG VTVATADISR KDERELKRER  360
RKQSNRESAR RSRLRKQAET EELAMKVETL GAENMALRSE ISRLSEKSDN LRLENSTLME  420
KLKTSQSSQA EEMSAAKMET EGVPSVVAEN FLSIIENSSS ISASAQQQDE ACENSSGKLH  480
QLLDSKPRTD ALAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1369375RRSRLRK
2369376RRSRLRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008791472.10.0G-box-binding factor 3-like isoform X1
TrEMBLA0A2H3Y0540.0A0A2H3Y054_PHODC; G-box-binding factor 3-like isoform X1
STRINGXP_008791471.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.22e-44G-box binding factor 3