PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1101051g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 441aa    MW: 48844.5 Da    PI: 6.1002
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1101051g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.23.8e-11147761128
                 NAM  61 FskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         F+ +  k++tg+ + r++ +gyWk+t k + +++ +g+ vg  + L +++g++    +t+W+m+ey+l
  PDK_30s1101051g001  14 FCFTPIKHRTGNCRDRSAPDGYWKSTKKRTVIHNDEGRSVGFVQDLCYHHGKR----RTKWLMKEYTL 77 
                         555556777899999*99**********9999999**************6543....79*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100513.0431103IPR003441NAC domain
SuperFamilySSF1019412.88E-121384IPR003441NAC domain
PfamPF023656.2E-71477IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    Send to blast
MAGDLIPGDD GRLFCFTPIK HRTGNCRDRS APDGYWKSTK KRTVIHNDEG RSVGFVQDLC  60
YHHGKRRTKW LMKEYTLVGD LPKNKCKDRI QGNEWRMTPN CLDNAPSFNQ WSRWNKPHEA  120
IDSESEDTRL PYLSYDLSSL GRTTKDECHQ YLKSVAAKTG ESYHKIVFMA LNLAAAEVAQ  180
KFGEPEERVG PSKTEGAFTF ESSQGSPSPT ATSVGYVSGG EGCSGSSSVA DVSDWPLDVD  240
LDFLDFGAPL QESPSVAPFK EGELAEAPAC PGMLPDTCSP ETNNCCVMDA SNGTECIFWM  300
FIVPRVLQEP ISSINAGFSS WLYGAYHTGS VAVLGTDDVP IFEEGPRRHL WLATPNGRDH  360
GGVSGMPRPA MTIKTEDKKY QNMKDFAYDQ FGDSSARFKR EIVAVVVPRV KGPTNGERAA  420
DSDSRWQHQF HQRNKGSDLS N
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029117988.11e-70uncharacterized protein LOC114913486
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2941924
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32870.15e-08NAC domain protein 13