PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1138471g008
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 149aa    MW: 15902.4 Da    PI: 4.6011
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1138471g008genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.11.1e-10105126122
                         ---SS-EEEEEEE--TT-SS-E CS
                WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                         ldDg++WrKYG+K+vk+s++pr
  PDK_30s1138471g008 105 LDDGFKWRKYGKKSVKNSPNPR 126
                         59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.2E-1192126IPR003657WRKY domain
SuperFamilySSF1182906.93E-997127IPR003657WRKY domain
PROSITE profilePS5081112.817100126IPR003657WRKY domain
SMARTSM007742.3E-5105149IPR003657WRKY domain
PfamPF031062.2E-6106126IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MAYLPSQAGR EGGSYDDLES DQPAAFDISD YILSDEVTAP ASFGQPESPV PPMVGVGQTA  60
TQTSSGSNLS AAGSSGSATR SAVERLRTDE GSKIAFRTKS EVEILDDGFK WRKYGKKSVK  120
NSPNPRLKTV SFSYDGSTIS WFGDVRDCS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008810071.19e-86probable WRKY transcription factor 50
TrEMBLA0A2H3Z8M92e-84A0A2H3Z8M9_PHODC; probable WRKY transcription factor 50
STRINGXP_008810071.14e-85(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44137206
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.16e-16WRKY DNA-binding protein 50